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PCR test to detect T315I


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#1 CallMeLucky

CallMeLucky

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Posted 09 February 2011 - 11:33 AM

Not sure how readily available this is yet, but thought I would share it.  Would be great if they could include this test for everyone when first diagnosed or first sign of resistance to determine if T315I is involved

http://7thspace.com/...a_patients.html

A single-tube allele specific-polymerase chain reaction to detect T315I  resistant mutation in chronic myeloid leukemia patients

BCR-ABL kinase domain (KD) mutation is the major  mechanism contributing to suboptimal response to tyrosine kinase inhibitors  (TKI) in BCR-ABL-positive chronic myeloid leukemia (CML) patients. T315I  mutation, as one of the most frequent KD mutations, has been shown to be  strongly associated with TKI resistance and subsequent therapeutic  failure.

A simple and sensitive method is thus required to detect T315I  mutation at the earliest stage.

Methods: A single-tube allele  specific-polymerase chain reaction (AS-PCR) method was developed to detect T315I  mutation in a mixture of normal and mutant alleles of varying dilutions.  Denaturing high performance liquid chromatography (DHPLC) and direct sequencing  were performed as a comparison to AS-PCR.

Results: T315I mutant bands  were observed in the mixtures containing as low as 0.5-1% of mutant alleles by  AS-PCR.

The detection sensitivity of DHPLC was around 1.5-3% dilution  whereas sequencing analysis was unable to detect below 6.25% dilution.

Conclusion: A single-tube AS-PCR is a rapid and sensitive screening  method for T315I mutation. Detection of the most resistant leukemic clone in CML  patients undergoing TKI therapy should be feasible with this simple and  inexpensive method.

Author: Wanwisa WongboonmaWanna ThongnoppakhunChirayu  Auewarakul

Credits/Source: Journal of Hematology &Oncology 2011,  4:7


Date  -  Lab  -  Scale  -  Drug  -  Dosage MG  - PCR
2010/Jul -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 1.2%
2010/Oct -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0.25%
2010/Dec -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0.367%
2011/Mar -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0.0081%
2011/Jun -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0%
2011/Sep -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0.00084%
2011/Dec -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0%
2012/Mar -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0.004%
2012/Jun -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0%
2012/Sep -  MSKCC  -  Non-IS  -  Gleevec  - 400 - 0%
2012/Dec -  MSKCC  -  Non-IS  -  Sprycel  - 100 - 0%
2013/Jan -  Quest  -  IS  -  Sprycel  -  50-60-70  - 0%
2013/Mar -  Quest  -  IS  -  Sprycel  -  60-70  - 0%
2013/Apr -  CUMC  -  Non-IS  -  Sprycel  - 50 - 0.036%
2013/May -  CUMC  -  Non-IS  -  Sprycel  - 50 - 0.046%
2013/Jun -  Genoptix  -  IS  -  Sprycel  - 50 - 0.0239%
2013/Jul -  Genoptix  -  IS  -  Sprycel  - 70 - 0.0192%
2013/Jul -  Genoptix  -  IS  -  Sprycel  - 70 - 0.0034%
2013/Oct -  Genoptix  -  IS  -  Sprycel  - 70 - 0.0054%
2014/Jan -  Genoptix  -  IS  -  Sprycel  - 70 - 0.0093%
2014/Mar -  Genoptix  -  IS  -  Sprycel  - 100 - 0.013%
2014/Apr -  Genoptix  -  IS  -  Sprycel  - 100 - 0.0048%
2014/Jul -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2014/Nov -  Genoptix  -  IS  -  Sprycel  - 100 - 0.047%
2014/Dec -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2015/Mar -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2015/Jun -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2015/Sep -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2015/Dec -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2016/Mar -  Genoptix  -  IS  -  Sprycel  - 100 - 0.0228%
2016/Jun -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2016/Sep -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2016/Dec -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2017/Mar -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2017/Jun -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2017/Sep -  Genoptix  -  IS  -  Sprycel  - 100 - 0%
2017/Dec - Genoptix  -  IS  -  Sprycel  -  100 - 0%
 

 





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